User profiles for Rebecca Hodge

Rebecca D Hodge

Allen Institute for Brain Science
Verified email at alleninstitute.org
Cited by 9524

Conserved cell types with divergent features in human versus mouse cortex

RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan… - Nature, 2019 - nature.com
Elucidating the cellular architecture of the human cerebral cortex is central to understanding
our cognitive abilities and susceptibility to disease. Here we used single-nucleus RNA-…

[HTML][HTML] Comparative cellular analysis of motor cortex in human, marmoset and mouse

…, BB Lake, W Tian, BE Kalmbach, M Crow, RD Hodge… - Nature, 2021 - nature.com
The primary motor cortex (M1) is essential for voluntary fine-motor control and is functionally
conserved across mammals 1 . Here, using high-throughput transcriptomic and epigenomic …

[HTML][HTML] Human neocortical expansion involves glutamatergic neuron diversification

…, A Budzillo, N Dee, SL Ding, NW Gouwens, RD Hodge… - Nature, 2021 - nature.com
The neocortex is disproportionately expanded in human compared with mouse 1 , 2 , both
in its total volume relative to subcortical structures and in the proportion occupied by …

Genetic identification of brain cell types underlying schizophrenia

…, HA Gaspar, P Giusti-Rodriguez, RD Hodge… - Nature …, 2018 - nature.com
With few exceptions, the marked advances in knowledge about the genetic basis of schizophrenia
have not converged on findings that can be confidently used for precise experimental …

[HTML][HTML] Single-nucleus and single-cell transcriptomes compared in matched cortical cell types

TE Bakken, RD Hodge, JA Miller, Z Yao, TN Nguyen… - PloS one, 2018 - journals.plos.org
Transcriptomic profiling of complex tissues by single-nucleus RNA-sequencing (snRNA-seq)
affords some advantages over single-cell RNA-sequencing (scRNA-seq). snRNA-seq …

Transcription factors in glutamatergic neurogenesis: conserved programs in neocortex, cerebellum, and adult hippocampus

RF Hevner, RD Hodge, RAM Daza, C Englund - Neuroscience research, 2006 - Elsevier
Glutamatergic, pyramidal-projection neurons are produced in the embryonic cerebral cortex
by a series of genetically programmed fate choices, implemented in large part by …

Intermediate neuronal progenitors (basal progenitors) produce pyramidal–projection neurons for all layers of cerebral cortex

…, C Englund, RAM Daza, F Bedogni, R Hodge… - Cerebral …, 2009 - academic.oup.com
The developing cerebral cortex contains apical and basal types of neurogenic progenitor
cells. Here, we investigated the cellular properties and neurogenic output of basal progenitors, …

Adult generation of glutamatergic olfactory bulb interneurons

MS Brill, J Ninkovic, E Winpenny, RD Hodge… - Nature …, 2009 - nature.com
The adult mouse subependymal zone (SEZ) harbors neural stem cells that are thought to
exclusively generate GABAergic interneurons of the olfactory bulb. We examined the adult …

Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons

…, SB Linker, S Pham, JA Erwin, JA Miller, R Hodge… - Nature protocols, 2016 - nature.com
A protocol is described for sequencing the transcriptome of a cell nucleus. Nuclei are isolated
from specimens and sorted by FACS, cDNA libraries are constructed and RNA-seq is …

Tbr1 regulates regional and laminar identity of postmitotic neurons in developing neocortex

F Bedogni, RD Hodge, GE Elsen… - Proceedings of the …, 2010 - National Acad Sciences
Areas and layers of the cerebral cortex are specified by genetic programs that are initiated in
progenitor cells and then, implemented in postmitotic neurons. Here, we report that Tbr1, a …