A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples

…, KC Luk, B Enge, DA Wadford, SL Messenger… - Genome …, 2014 - genome.cshlp.org
Unbiased next-generation sequencing (NGS) approaches enable comprehensive pathogen
detection in the clinical microbiology laboratory and have numerous applications for public …

Case definitions, diagnostic algorithms, and priorities in encephalitis: consensus statement of the international encephalitis consortium

…, D Brown, E Farnon, S Messenger… - Clinical Infectious …, 2013 - academic.oup.com
Background. Encephalitis continues to result in substantial morbidity and mortality
worldwide. Advances in diagnosis and management have been limited, in part, by a lack of …

Emerging epidemiology of bat-associated cryptic cases of rabies in humans in the United States

SL Messenger, JS Smith… - Clinical Infectious …, 2002 - academic.oup.com
In the United States, during the past half-century, the number of humans to die of rabies
dramatically decreased to an average of 1–2 per year. Although the number of deaths is low, …

[HTML][HTML] Evaluation and validation of a real-time polymerase chain reaction assay for rapid identification of Bacillus anthracis

…, RS Weyant, K Thurman, SL Messenger… - Emerging infectious …, 2002 - ncbi.nlm.nih.gov
To the Editor: During the 2001 anthrax outbreak, we evaluated and validated a highly sensitive
and specific three-target (two plasmid and one chromosomally located target) 5 nuclease …

[HTML][HTML] A forty-year review of Rocky Mountain spotted fever cases in California shows clinical and epidemiologic changes

…, K Padgett, CD Paddock, S Messenger… - PLoS Neglected …, 2022 - journals.plos.org
Rocky Mountain spotted fever (RMSF) is a life-threatening tick-borne disease documented
in North, Central, and South America. In California, RMSF is rare; nonetheless, recent fatal …

Morphology, molecules, and the phylogenetics of cetaceans

SL Messenger, JA McGuire - Systematic Biology, 1998 - academic.oup.com
Recent phylogenetic analyses of cetacean relationships based on DNA sequence data
have challenged the traditional view that baleen whales (Mysticeti) and toothed whales (…

A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012–14): a retrospective cohort study

…, C Anderson, S Yagi, S Messenger… - The Lancet Infectious …, 2015 - thelancet.com
Background Enterovirus D68 was implicated in a widespread outbreak of severe respiratory
illness across the USA in 2014 and has also been reported sporadically in patients with …

Virulence evolution in a virus obeys a trade off

SL Messenger, IJ Molineux… - Proceedings of the …, 1999 - royalsocietypublishing.org
The evolution of virulence was studied in a virus subjected to alternating episodes of
vertical and horizontal transmission. Bacteriophage f1 was used as the parasite because it …

Rhinovirus associated with severe lower respiratory tract infections in children

…, D Kiang, T Padilla, S Yagi, S Messenger… - The Pediatric …, 2009 - journals.lww.com
Rhinovirus is a respiratory virus most typically associated with the common cold and asthma
exacerbations, and has not traditionally been considered to play a major role in severe …

[HTML][HTML] Bat-associated rabies virus in skunks

MJ Leslie, S Messenger, RE Rohde… - Emerging infectious …, 2006 - ncbi.nlm.nih.gov
Rabies was undetected in terrestrial wildlife of northern Arizona until 2001, when rabies was
diagnosed in 19 rabid skunks in Flagstaff. Laboratory analyses showed causative rabies …